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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs185566 chr5:114646029 A/G 0 490 15.8 16.63 15.33 KM Plot
THCA rs185579016 chr14:59691750 T/G 0 487 15.9 16.4 3.53 KM Plot
THCA rs185743320 chr17:45864859 G/C 2.05E-5 487 15.13 16.6 16.63 KM Plot
THCA rs1861287 chr7:29817973 G/A 4.15E-5 487 16.2 14.82 12.83 KM Plot
THCA rs186569587 chr14:59691754 T/G 0 488 15.9 16.4 3.53 KM Plot
THCA rs1869760 chr1:219576851 T/A 0.000193 480 15.17 19.73 12.47 KM Plot
THCA rs187190567 chr11:5888523 A/G 1.55E-5 487 15.67 16.52 14.18 KM Plot
THCA rs187255938 chr3:53959916 G/A 0 485 15.83 17.6 6.03 KM Plot
THCA rs187348535 chr14:59731359 T/C 1.6E-8 488 16.38 12.62 5.45 KM Plot
THCA rs1877030 chr17:37740161 T/C 0.000238 477 15.83 16.17 15.98 KM Plot
THCA rs1878213 chr3:155631472 A/G 0.000203 488 9 14.63 16.47 KM Plot
THCA rs187984232 chr20:61492362 C/A 5.0E-5 480 15.15 17.23 14.55 KM Plot
THCA rs189070666 chr15:69910515 T/C 2.51E-11 486 16.07 16.87 12.47 KM Plot
THCA rs1891103 chr13:24879877 A/T 0.00021 490 15.2 17.75 17.1 KM Plot
THCA rs1891701 chr4:3141130 G/A 7.58E-5 489 17.03 14.03 14.3 KM Plot